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 # QQsci
 
-QQsci is a Codex workflow skill for scientific manuscript projects. It acts as
-the top-level orchestrator for materials-science writing, literature-grounded
-revision, submission-package audit, Word DOI-only citation comments, and future
-specialized modules such as QQwrite, QQfigure, and QQppt.
+QQsci 是一个面向科研论文项目的 Codex 工作流总控 skill。它不是单一写作工具，而是负责调度论文项目中的文献、写作、图表、投稿包检查、引用批注和返修相关流程。
 
-It is designed for workflows that combine:
+当前重点面向材料科学论文，尤其适合处理：
 
-- manuscript and Supporting Information `.docx` files
-- main figures, SI figures, and TOC `.pptx` files
-- Zotero literature items and AI-generated Zotero child notes
-- QQnote-generated literature summaries or comparison tables
-- target-journal positioning and reviewer-style pre-submission audit
-- AFM Word article template assets
+- `Manuscript.docx` 主稿
+- `Supplementary Information.docx` 补充信息
+- `Figures.pptx` 主图
+- `Supplementary Information.pptx` 补充图
+- `Highlights.docx`
+- `CoverLetter.docx`
+- `TOC.pptx`
+- Zotero 文献和 QQnote 生成的 AI 文献笔记
+- AFM 等材料期刊的投稿模板和整包质控
 
-## Workflow Role
+## 核心定位
 
-QQsci is the research-writing workflow controller, not a single-purpose writing
-tool. It should decide which module to call, pass structured inputs between
-modules, and perform final package-level quality control.
+QQsci 的定位是：
 
-Planned module ecosystem:
+```text
+科研论文工作流总调度器
+```
 
-| Module | Role |
-|---|---|
-| QQnote | Zotero child-note summaries and paper comparison tables |
-| QQwrite | Long-form manuscript drafting, section rewriting, and Word template use |
-| QQfigure | Materials figures, mechanism diagrams, TOC graphics, and figure QA |
-| QQppt | Group meeting, journal club, submission, and defense slides |
-| nature-citation | High-quality DOI candidates and claim-reference support |
-| nature-data | Data availability, source data, repository, and FAIR checks |
-| nature-response | Reviewer-response and revision-letter workflows |
-| academic-humanizer | Academic de-AI wording, style naturalization, and consistency checks |
+它负责判断当前任务应该交给哪个模块，如何传递输入输出，以及最后如何把所有结果合并为一个可投稿的论文包。
 
-QQsci's built-in modules remain the quality-control layer until specialized
-QQ* modules are developed.
+## 当前已经具备的能力
 
-## Current Scope
+QQsci 当前内置以下能力：
 
-QQsci owns the manuscript-facing reasoning:
+- 从主题、初稿、图注、SI 或 cover material 中提取关键词
+- 根据文献笔记筛选强相关和弱相关论文
+- 使用强相关论文对比检查创新性、机制证据、控制实验和 benchmark
+- 检查主稿、SI、Figures、Highlights、Cover Letter、TOC 的整包一致性
+- 检查图表逻辑、图注、单位、样品名、术语、拼写和格式问题
+- 生成 Markdown 版 reviewer report
+- 在 Word 主稿中添加原生批注，批注内容只包含 DOI，一行一个 DOI
+- 管理 DeepSeek、Zotero、Obsidian、QQnote 和模板路径配置
+- 保存 AFM Word 文章模板资产
 
-- extract manuscript keywords from topic, draft, figures, SI, or cover material
-- classify strongly and weakly related papers
-- compare the manuscript with strongly related papers
-- audit missing experiments, controls, mechanisms, benchmarks, and statistics
-- check figures, captions, SI consistency, formatting, spelling, and terminology
-- produce Markdown reviewer reports
-- add Word native citation comments containing DOI strings only
-- route work to QQnote and future QQwrite/QQfigure/QQppt modules
-- manage project-level DeepSeek, Zotero, Obsidian, and template configuration
+QQsci 不直接插入 Zotero Word citation field。对于 Word 主稿，QQsci 只用 Word 原生批注标出 DOI，正式插入引用仍建议使用 Zotero Word 插件。
 
-QQsci does not directly insert Zotero Word fields. For Word manuscripts, citation
-suggestions are added as native comments with one DOI per line.
+## QQnote 的角色
 
-## QQnote Relationship
+QQnote 是 QQsci 的文献输入工具。
 
-QQnote is used only as the literature-note input tool.
+QQnote 负责：
 
-QQnote may:
+- 从 Zotero 条目生成 AI 文献笔记
+- 将结果写入 Zotero child note
+- 将选中文献总结成 Markdown 对比表
+- 审计哪些 Zotero 条目缺少 AI 笔记
 
-- generate or refresh Zotero child-note summaries
-- summarize selected Zotero papers into Markdown comparison tables
+QQnote 不负责判断：
 
-QQsci then consumes those notes/tables and makes the manuscript decisions. QQnote
-should not decide whether a paper is strongly related, weakly related, necessary
-for citation, or sufficient as reviewer evidence.
+- 哪篇文献是强相关或弱相关
+- 哪篇文献必须引用
+- 哪篇文献足以支撑 reviewer 级别的证据
+- 文章创新性是否足够
+- 投稿包是否达标
 
-QQnote must remain usable by itself. When QQsci calls QQnote, QQsci can inject
-its own DeepSeek and Zotero configuration through
-`scripts/run_qqnote_with_qqsci_config.py`.
+这些判断都由 QQsci 完成。
 
-When QQsci calls QQnote, use:
+当 QQsci 调用 QQnote 时，推荐使用：
 
 ```powershell
 py "$env:USERPROFILE\.codex\skills\qqsci\scripts\run_qqnote_with_qqsci_config.py" --script summarize_zotero_table -- --vault "C:\Users\qyh15\Documents\Obsidian Vault" --item-keys "SXAIQUJT X7GJZ627"
 ```
 
-## Configuration
+这个 wrapper 会读取 QQsci 的本地配置，并把 DeepSeek/Zotero 配置注入为 QQnote 需要的环境变量。
 
-Use `config/config.template.json` as the public template and create a private
-local file:
+## 配置方式
+
+公开模板：
+
+```text
+config/config.template.json
+```
+
+真实本地配置：
 
 ```text
 config/config.local.json
 ```
 
-Do not commit `config/config.local.json`.
+不要提交 `config/config.local.json`，不要在聊天、README、日志或终端输出中泄露 API key。
 
-QQsci is the top-level configuration owner for manuscript workflows. It maps its
-DeepSeek and Zotero settings into QQnote-compatible environment variables when
-calling QQnote:
+QQsci 会把自己的配置映射到 QQnote 所需环境变量：
 
-- `deepseek.api_key` -> `AWESOMEGPT_API_KEY`
-- `deepseek.base_url` -> `AWESOMEGPT_BASE_URL`
-- `deepseek.model` -> `AWESOMEGPT_MODEL`
-- `zotero.web_api_key` -> `ZOTERO_API_KEY`
-- `zotero.user_id` -> `ZOTERO_USER_ID`
+| QQsci 配置 | QQnote 环境变量 |
+|---|---|
+| `deepseek.api_key` | `AWESOMEGPT_API_KEY` |
+| `deepseek.base_url` | `AWESOMEGPT_BASE_URL` |
+| `deepseek.model` | `AWESOMEGPT_MODEL` |
+| `zotero.web_api_key` | `ZOTERO_API_KEY` |
+| `zotero.user_id` | `ZOTERO_USER_ID` |
 
-QQnote remains independently usable through its own environment variables, vault
-`.env`, or AwesomeGPT/Zotero preferences.
+QQnote 单独运行时仍然可以使用自己的环境变量、vault `.env` 或 AwesomeGPT/Zotero preferences。
 
-## Submission Package Audit
+## 投稿整包检查顺序
 
-For a full submission package, QQsci checks files in this order:
+对于完整投稿包，QQsci 默认按以下顺序检查：
 
 1. `Manuscript.docx`
 2. `Figures.pptx`
@@ -112,29 +109,60 @@ For a full submission package, QQsci checks files in this order:
 6. `CoverLetter.docx`
 7. `TOC.pptx`
 
-The manuscript and main figures define the story. SI, highlights, cover letter,
-and TOC must stay consistent with that story.
+主稿和主图决定故事线，SI、Highlights、Cover Letter 和 TOC 必须与它们保持一致。
 
-## Writing Templates
+## 写作模板
 
-Bundled template:
+当前内置 AFM Word 模板：
 
 ```text
 assets/templates/afm/article-template.docx
 ```
 
-This is stored as an asset. Do not edit it in place. Copy it to a manuscript
-output path before use.
+模板作为 asset 保存，不应直接原地修改。使用时应复制到具体论文输出路径。
 
-QQsci can keep journal templates and evidence/audit logic. A future QQwrite
-skill can reuse these templates for long-form manuscript drafting and formatting.
+未来 QQwrite 可以复用这些模板，用于长文写作、模板化初稿和 Word 格式整理。
 
-## Installed Location
+## 未来模块规划
 
-For Codex discovery, install under:
+QQsci 会逐步发展成调度多个专业 skill 的工作流中心：
+
+| 模块 | 规划职责 |
+|---|---|
+| QQnote | 文献笔记、Zotero child notes、文献对比表 |
+| QQwrite | 正文写作、章节重写、Word 模板化成稿 |
+| QQfigure | 材料图表、机制图、TOC、图像质控 |
+| QQppt | 组会、论文汇报、投稿展示 PPT |
+| academic-humanizer | 学术语言去 AI 味、自然化和风格统一 |
+
+在这些模块成熟之前，QQsci 内置的质控模块继续承担论文审稿、证据链检查和整包一致性检查。
+
+## 安装位置
+
+Codex 识别路径：
 
 ```text
 C:\Users\qyh15\.codex\skills\qqsci
 ```
 
-The source repository is maintained separately and can be pushed to Gitea.
+源仓库可推送到 Gitea：
+
+```text
+git@git.qyhhh.top:Skills/QQsci-skill.git
+```
+
+## 依赖和协作 skill
+
+QQsci 当前或未来会依赖/协作以下 skill：
+
+- `QQnote-skill`：Zotero + DeepSeek 文献笔记和文献对比表输入
+- `nature-citation`：高质量 DOI 候选和 claim-reference 支撑
+- `nature-data`：Data availability、source data、FAIR 和数据仓库检查
+- `nature-response`：审稿意见回复和返修信
+- `nature-figure`：投稿级科学图表生成和质量检查
+- `nature-paper2ppt`：论文到汇报 PPT
+- `nature-writing` / `nature-polishing`：Nature 风格写作结构和语言策略参考
+- `QQwrite`：未来用于长文写作和 Word 模板化成稿
+- `QQfigure`：未来用于材料图表、TOC 和机制图工作流
+- `QQppt`：未来用于组会、论文汇报和投稿展示
+- `academic-humanizer`：未来用于学术文本去 AI 味和风格自然化